Tareen, A., N. S. Wingreen, and R. Mukhopadhyay. (2020) 2020. “Asymmetry Between Activators and Deactivators in Functional Protein Networks”. Sci Rep 10: 10131.

Saad-Roy, C. M., N. S. Wingreen, S. A. Levin, and B.T. Grenfell. (2020) 2020. “Dynamics in a Simple Evolutionary-Epidemiological Model for the Evolution of an Initial Asymptomatic Infection Stage”. Proc Natl Acad Sci U S A 117: 11541-50.

Saad-Roy, C. M., N. Arinaminpathy, N. S. Wingreen, S. A. Levin, J. M. Akey, and B.T. Grenfell. (2020) 2020. “Implications of Localized Charge for Human Influenza A H1N1 Hemagglutinin Evolution: Insights from Deep Mutational Scans”. PLoS Comput Biol 16: e1007892.

Rath, S., E. Prangley, J. Donovan, K. Demarest, N. S. Wingreen, Y. Meir, and A. Korennykh. (2019) 2019. “Concerted 2-5A-Mediated MRNA Decay and Transcription Reprogram Protein Synthesis in the DsRNA Response”. Mol Cell 75: 1218-1228.e6.

Chitrakar, A., S. Rath, J. Donovan, K. Demarest, Y. Li, R. R. Sridhar, S. R. Weiss, S. V. Kotenko, N. S. Wingreen, and A. Korennykh. (2019) 2019. “Real-Time 2-5A Kinetics Suggest That Interferons β and λ Evade Global Arrest of Translation by RNase L”. Proc Natl Acad Sci U S A 116: 2103-11.

Shin, Y., Y. C. Chang, D. S. W. Lee, J. Berry, D. W. Sanders, P. Ronceray, N. S. Wingreen, M. Haataja, and C.P. Brangwynne. (2018) 2018. “Liquid Nuclear Condensates Mechanically Sense and Restructure the Genome”. Cell 175: 1481-1491.e13.

Beroz, F., L. M. Jawerth, S. Münster, D. A. Weitz, C. P. Broedersz, and N. S. Wingreen. (2017) 2017. “Physical Limits to Biomechanical Sensing in Disordered Fibre Networks”. Nat Commun 8: 16096.

Brackley, C. A., S. Taylor, A. Papantonis, P. R. Cook, and D. Marenduzzo. (2013) 2013. “Nonspecific Bridging-Induced Attraction Drives Clustering of DNA-Binding Proteins and Genome Organization”. Proc Natl Acad Sci U S AProc Natl Acad Sci U S A 110.

Zhang, Y., D. S. W. Lee, Y. Meir, C.P. Brangwynne, and N. S. Wingreen. (2021) 2021. “Mechanical Frustration of Phase Separation in the Cell Nucleus by Chromatin”. Phys Rev Lett 126: 258102.

Saad-Roy, C. M., B.T. Grenfell, S. A. Levin, P. Driessche, and N. S. Wingreen. (2021) 2021. “Evolution of an Asymptomatic First Stage of Infection in a Heterogeneous Population”. J R Soc Interface 18: 20210175.

Pareek, V., Z. Sha, J. He, N. S. Wingreen, and S. J. Benkovic. (2021) 2021. “Metabolic Channeling: Predictions, Deductions, and Evidence”. Mol Cell 81: 3775-85.

Sourjik, Victor, and Ned Wingreen. (2007) 2007. “Turning to the Cold.”. Nat Cell Biol 9 (9): 1029-31. doi:10.1038/ncb0907-1029.

Zee, Barry, Rebecca Levin, Bo Xu, Gary LeRoy, Ned Wingreen, and Benjamin Garcia. (2010) 2010. “In Vivo Residue-Specific Histone Methylation Dynamics.”. J Biol Chem 285 (5): 3341-50. doi:10.1074/jbc.M109.063784.

Endres, Robert, and Ned Wingreen. (2009) 2009. “Maximum Likelihood and the Single Receptor.”. Phys Rev Lett 103 (15): 158101. doi:10.1103/PhysRevLett.103.158101.

Nara, Peter, Gregory Tobin, Ray Chaudhuri, Jessie Trujillo, George Lin, Michael Cho, Simon Levin, Wilfred Ndifon, and Ned Wingreen. (2010) 2010. “How Can Vaccines Against Influenza and Other Viral Diseases Be Made More Effective?”. PLoS Biol 8 (12): e1000571. doi:10.1371/journal.pbio.1000571.

Neumann, Silke, Clinton Hansen, Ned Wingreen, and Victor Sourjik. (2010) 2010. “Differences in Signalling by Directly and Indirectly Binding Ligands in Bacterial Chemotaxis.”. EMBO J 29 (20): 3484-95. doi:10.1038/emboj.2010.224.

Tikhonov, Mikhail, Robert Leach, and Ned Wingreen. (2015) 2015. “Interpreting 16S Metagenomic Data Without Clustering to Achieve Sub-OTU Resolution.”. ISME J 9 (1): 68-80. doi:10.1038/ismej.2014.117.

Sonnenburg, Erica, Samuel Smits, Mikhail Tikhonov, Steven Higginbottom, Ned Wingreen, and Justin Sonnenburg. (2016) 2016. “Diet-Induced Extinctions in the Gut Microbiota Compound over Generations.”. Nature 529 (7585): 212-5. doi:10.1038/nature16504.