Dwyer, Robert, Dante Ricci, Lucy Colwell, Thomas Silhavy, and Ned Wingreen. (2013) 2013. “Predicting Functionally Informative Mutations in Escherichia Coli BamA Using Evolutionary Covariance Analysis.”. Genetics 195 (2): 443-55. doi:10.1534/genetics.113.155861.

Bitbol, Anne-Florence, Robert Dwyer, Lucy Colwell, and Ned Wingreen. (2016) 2016. “Inferring Interaction Partners from Protein Sequences.”. Proc Natl Acad Sci U S A 113 (43): 12180-85. doi:10.1073/pnas.1606762113.